Kuijjer Lab

Recent Posts

  • September 20, 2021

    New network tools

    We updated the website's tools section to include new methods developed by the group that will be released soon, including PORCUPINE and retriever.

  • September 15, 2021

    Building bridges

    The NCMM recently interviewed Marieke about some of the group's collaborations. The news article, Building Bridges, can be accessed here. It also includes some updates on our research in the past year.

  • September 13, 2021

    New publication

    We are happy to announce that Marouen's database, the Gene RegulAtory Network Database (GRAND) has been published in Nucleic Acids Research! GRAND was developed in the Quackenbush group and is a large resource of genome-wide networks across multiple human tissues, disease states, and cell lines. It hosts, for example, all of the patient-specific gene regulatory networks we modeled for our recently published study in...

  • September 08, 2021

    New publication

    We are thrilled to announce that our comparative network analysis in glioblastoma has been accepted for publication in Cancer Research and is now available in OnlineFirst version.

  • September 02, 2021

    New BioRxiv pre-print

    Marouen Ben Guebila from the Quackenbush group developed gpuZoo, a cost-effective tool that leverages GPU computing to model gene regulatory networks with methods such as PUMA, and LIONESS. The method is available in NetZoo. The BioRĪ‡iv pre-print can be found here. More information on the pre-print can be found here.