Recent Posts

• September 29, 2023

  Gabriel successfully defended his thesis

  This week, Gabriel successfully defended his Master's thesis "Network Analysis of the 3D Genome" at the Department of Biosciences (IBV), University of Oslo. His thesis and presentation were examined by internal censor Lex Nederbragt from IBV and IFI, and external censor Martin Kuiper from NTNU. Gabriel developed a pipeline to convert Hi-C data to networks, which can be used for network analysis of 3D chromatin...

• September 26, 2023

  New group member

  We are very excited to announce that Nolan Newman has joined the lab as a postdoctoral fellow. Nolan has a PhD in Pharmaceutical Sciences, with a minor in Biological Data Sciences, from Oregon State University. Nolan's project involves modeling and analysis of patient-specific gene regulatory networks for the subtyping of breast cancer.

• September 18, 2023

  Gabriel's thesis defense

  On September 17, Gabriel will be defending his Master's thesis "Network Analysis of the 3D Genome" at the Department of Biosciences (IBV), University of Oslo! Please see here for more information.

• September 04, 2023

  Three new students

  Today, we are welcoming three new students in the group: Arturo Kenzuke Nakamura Garcia, Patricio López Sánchez, and Ine Bonthuis. Arturo and Patrick are PhD and MSc students from the group of Jesús Espinal-Enríquez at the National Institute of Genomic Medicine (INMEGEN) in Mexico. Their work concerns single-sample network analysis in cancer and are joining the group as exchange students on scholarships from Mexico. Ine...

• July 31, 2023

  New publication

  We recently published our latest work, led by Tatiana, in NAR Cancer. Tatiana developed a computational approach, called PORCUPINE, to map heterogeneity in individual patient gene regulatory networks and applied it to study leiomyosarcoma, an aggressive cancer that can develop in smooth muscle tissue.