Recent Posts

• December 02, 2022

  Marie Curie Scientia Fellowship to Ladislav

  We are delighted to announce that Ladislav has received a Marie Curie Scientia Fellowship for his postdoctoral project. His fellowship started on Dec 1 and focuses on modeling spatially resolved gene regulation. Congratulations Ladislav!

• November 01, 2022

  New BioRχiv pre-print

  We have posted a new version of our previous BioRχiv pre-print on large-scale network analysis by Tatiana. We modeled networks for individual soft-tissue sarcoma patients and identified large regulatory heterogeneity in leiomyosarcomas. To characterize this regulatory heterogeneity, Tatiana developed a new algorithm, called PORCUPINE. PORCUPINE is a permutation-based approach that uses Principal Components Analysis to identifies pathways that significantly contribute to regulatory heterogeneity in a patient population. We...

• October 28, 2022

  New publication

  We have a new publication in the Journal of Pathology as part of a collaboration with David Adams from the Wellcome Sanger Institute. The work investigates the mutational landscape of primary cutaneous melanoma. More information on the publication can be found here.

• October 06, 2022

  New publication

  We have a new publication in Frontiers in Digital Health as part of a collaboration with several groups through the NCI/DOE 2020 Ideas Lab: Toward Building a Cancer Patient "Digital Twin". The article describes five new approaches to build predictive cancer patient digital twins. More information on the publication can be found here.

• August 31, 2022

  New publication

  We have a new publication in Cell Reports, as part of a collaboration with Victor Greiff, University of Oslo. Victor's team developed an approach to study immune receptor repertoires that uses similarity networks to derive a multidimensional picture of the immune repertoire landscape. More information on the publication can be found here.